Emedgene
Ctrlk
Illumina Connected Software
  • Get Started with Emedgene
    • Get started with Emedgene
    • How can Emedgene help you solve a case?
  • Emedgene Analyze manual
    • Getting around the platform
    • Managing data storage
    • Supported variant callers
    • Launching analysis
    • Reviewing a case
      • Individual case page
      • Case status
      • Individual case page: Top bar
      • Case details
      • Candidates tab
      • Lab tab
        • Summary dashboard
        • Sequencing lab information section
        • Case quality section
        • Sample quality section
          • NGS sample quality metrics
            • NGS sample quality
            • NGS sex validation
            • Ploidy
            • Contamination
            • Coverage
            • Percentage of mapped reads
            • Sequencing error rate
          • Array sample quality metrics
          • DRAGEN QC report
        • Pedigree section
        • Genes coverage section
      • Genome view tab
      • Analysis tools tab
      • Versions tab
      • Evidence page
      • Phenotypic match
      • Editing an existing case
      • Reflex genetic testing
      • Finalizing a case
      • Clinical Report
      • Variant zygosity notations
      • STR calling and interpretation
    • Reviewing a variant
    • Variant visualization
    • Analyze Network
    • Settings
    • Integrations
  • Emedgene Curate manual
    • Curate overview
    • Curate Variants
    • Curate Genes
    • Import Curate annotations to the case
  • Integrations
  • Frequently Asked Questions
    • All FAQ
  • Release Notes
    • Workbench & Pipeline Updates
    • Knowledgebase Updates
    • Change log
  • Legal
    • Privacy, Security & Compliance
    • Release Policy
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  1. Emedgene Analyze manual
  2. Reviewing a case
  3. Lab tab
  4. Sample quality section

NGS sample quality metrics

NGS sample qualityNGS sex validationPloidyContaminationCoveragePercentage of mapped readsSequencing error rate
PreviousSample quality sectionNextNGS sample quality

Last updated 24 days ago

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