# All FAQ

{% content-ref url="all-faq/failed\_to\_generate\_report\_what\_should\_i\_do" %}
[failed\_to\_generate\_report\_what\_should\_i\_do](https://help.emg.illumina.com/frequently-asked-questions/all-faq/failed_to_generate_report_what_should_i_do)
{% endcontent-ref %}

{% content-ref url="../emedgene-analyze-manual/tertiary-analysis-pipeline/annotation\_updates" %}
[annotation\_updates](https://help.emg.illumina.com/emedgene-analyze-manual/tertiary-analysis-pipeline/annotation_updates)
{% endcontent-ref %}

{% content-ref url="../emedgene-analyze-manual/settings/organization\_settings\_-330+/environment/platform-version/how\_do\_i\_check\_the\_version\_of\_my\_environment" %}
[how\_do\_i\_check\_the\_version\_of\_my\_environment](https://help.emg.illumina.com/emedgene-analyze-manual/settings/organization_settings_-330+/environment/platform-version/how_do_i_check_the_version_of_my_environment)
{% endcontent-ref %}

{% content-ref url="all-faq/how\_do\_i\_move\_between\_organizations" %}
[how\_do\_i\_move\_between\_organizations](https://help.emg.illumina.com/frequently-asked-questions/all-faq/how_do_i_move_between_organizations)
{% endcontent-ref %}

{% content-ref url="../emedgene-analyze-manual/settings/organization\_settings\_-330+/kit-management/bed-files/what\_is\_the\_required\_format\_for\_a\_bed\_file\_defining\_a\_kit" %}
[what\_is\_the\_required\_format\_for\_a\_bed\_file\_defining\_a\_kit](https://help.emg.illumina.com/emedgene-analyze-manual/settings/organization_settings_-330+/kit-management/bed-files/what_is_the_required_format_for_a_bed_file_defining_a_kit)
{% endcontent-ref %}

{% content-ref url="../emedgene-analyze-manual/tertiary-analysis-pipeline/how\_does\_joint\_calling\_work\_on\_emedgene" %}
[how\_does\_joint\_calling\_work\_on\_emedgene](https://help.emg.illumina.com/emedgene-analyze-manual/tertiary-analysis-pipeline/how_does_joint_calling_work_on_emedgene)
{% endcontent-ref %}

{% content-ref url="all-faq/can\_i\_use\_exome\_data\_for\_cnv\_detection" %}
[can\_i\_use\_exome\_data\_for\_cnv\_detection](https://help.emg.illumina.com/frequently-asked-questions/all-faq/can_i_use_exome_data_for_cnv_detection)
{% endcontent-ref %}

{% content-ref url="../emedgene-analyze-manual/supported-vcfs-variant-callers/how\_do\_i\_prepare\_vcf\_files\_generated\_by\_dragen\_manta\_to\_be\_used\_as\_input\_for\_emedgene" %}
[how\_do\_i\_prepare\_vcf\_files\_generated\_by\_dragen\_manta\_to\_be\_used\_as\_input\_for\_emedgene](https://help.emg.illumina.com/emedgene-analyze-manual/supported-vcfs-variant-callers/how_do_i_prepare_vcf_files_generated_by_dragen_manta_to_be_used_as_input_for_emedgene)
{% endcontent-ref %}

{% content-ref url="../emedgene-analyze-manual/supported-vcfs-variant-callers/str-calling/how\_do\_i\_prepare\_vcf\_files\_generated\_by\_dragen\_str\_to\_be\_used\_as\_input\_for\_emedgene" %}
[how\_do\_i\_prepare\_vcf\_files\_generated\_by\_dragen\_str\_to\_be\_used\_as\_input\_for\_emedgene](https://help.emg.illumina.com/emedgene-analyze-manual/supported-vcfs-variant-callers/str-calling/how_do_i_prepare_vcf_files_generated_by_dragen_str_to_be_used_as_input_for_emedgene)
{% endcontent-ref %}

{% content-ref url="all-faq/how\_do\_i\_analyze\_mtdna\_variants" %}
[how\_do\_i\_analyze\_mtdna\_variants](https://help.emg.illumina.com/frequently-asked-questions/all-faq/how_do_i_analyze_mtdna_variants)
{% endcontent-ref %}

{% content-ref url="../emedgene-analyze-manual/troubleshooting/which\_browser\_should\_i\_use\_with\_emedgene" %}
[which\_browser\_should\_i\_use\_with\_emedgene](https://help.emg.illumina.com/emedgene-analyze-manual/troubleshooting/which_browser_should_i_use_with_emedgene)
{% endcontent-ref %}

{% content-ref url="../emedgene-analyze-manual/troubleshooting/how\_do\_i\_use\_developer\_tools\_to\_collect\_logs" %}
[how\_do\_i\_use\_developer\_tools\_to\_collect\_logs](https://help.emg.illumina.com/emedgene-analyze-manual/troubleshooting/how_do_i_use_developer_tools_to_collect_logs)
{% endcontent-ref %}

{% content-ref url="all-faq/can\_i\_analyze\_illumina\_complete\_long\_reads\_in\_emedgene" %}
[can\_i\_analyze\_illumina\_complete\_long\_reads\_in\_emedgene](https://help.emg.illumina.com/frequently-asked-questions/all-faq/can_i_analyze_illumina_complete_long_reads_in_emedgene)
{% endcontent-ref %}

{% content-ref url="all-faq/source\_of\_gnomad\_data\_for\_small\_variants\_on\_grch38" %}
[source\_of\_gnomad\_data\_for\_small\_variants\_on\_grch38](https://help.emg.illumina.com/frequently-asked-questions/all-faq/source_of_gnomad_data_for_small_variants_on_grch38)
{% endcontent-ref %}

{% content-ref url="../emedgene-analyze-manual/tertiary-analysis-pipeline/how\_are\_mnvs\_handled\_on\_the\_platform" %}
[how\_are\_mnvs\_handled\_on\_the\_platform](https://help.emg.illumina.com/emedgene-analyze-manual/tertiary-analysis-pipeline/how_are_mnvs_handled_on_the_platform)
{% endcontent-ref %}

{% content-ref url="all-faq/support\_for\_gene\_lists\_with\_up\_to\_10-000\_genes" %}
[support\_for\_gene\_lists\_with\_up\_to\_10-000\_genes](https://help.emg.illumina.com/frequently-asked-questions/all-faq/support_for_gene_lists_with_up_to_10-000_genes)
{% endcontent-ref %}

{% content-ref url="../emedgene-analyze-manual/troubleshooting/performance\_issue\_troubleshooting" %}
[performance\_issue\_troubleshooting](https://help.emg.illumina.com/emedgene-analyze-manual/troubleshooting/performance_issue_troubleshooting)
{% endcontent-ref %}

{% content-ref url="../emedgene-analyze-manual/tertiary-analysis-pipeline/how\_does\_emedgene\_analyze\_prioritize\_transcripts" %}
[how\_does\_emedgene\_analyze\_prioritize\_transcripts](https://help.emg.illumina.com/emedgene-analyze-manual/tertiary-analysis-pipeline/how_does_emedgene_analyze_prioritize_transcripts)
{% endcontent-ref %}

{% content-ref url="../emedgene-analyze-manual/tertiary-analysis-pipeline/how\_does\_emedgene\_calculate\_variant\_effect\_and\_severity" %}
[how\_does\_emedgene\_calculate\_variant\_effect\_and\_severity](https://help.emg.illumina.com/emedgene-analyze-manual/tertiary-analysis-pipeline/how_does_emedgene_calculate_variant_effect_and_severity)
{% endcontent-ref %}

{% content-ref url="../emedgene-analyze-manual/reviewing\_a\_case/analysis-tools-tab/analysis\_tools\_tab/filters\_presets\_panel/filters/variant\_effect\_filters" %}
[variant\_effect\_filters](https://help.emg.illumina.com/emedgene-analyze-manual/reviewing_a_case/analysis-tools-tab/analysis_tools_tab/filters_presets_panel/filters/variant_effect_filters)
{% endcontent-ref %}